Biology

7

Graduate Research Talks: “The Roles of Polar Cell...

4:00pm

Brad Hull (Harrison Lab)

via Zoom

14

Graduate Research Talks

4:00pm

Ashleigh Glover (Linnen Lab)

via Zoom

21

Graduate Research Talks

4:00pm

Oliver Voecking, PhD (Famulski Lab)

via Zoom

28

Graduate Research Talks

4:00pm

Derek Cox (Seifert Lab)

via Zoom

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Recent PubMed Publications

Gómez, CM Arenas;Woodcock, MR ;Smith, JJ ;Voss, SR ;Delgado, JP "A de novo reference transcriptome for Bolitoglossa vallecula, an Andean mountain salamander in Colombia." Data in brief 29, (2020): 105256.

Nail, AN ;Smith, JJ ;Peterson, ML ;Spear, BT "Evolutionary Analysis of the Zinc Finger and Homeoboxes Family of Proteins Identifies Multiple Conserved Domains and a Common Early Chordate Ancestor." Genome biology and evolution (2020):

Hughes, RR ;Shaaban, KA ;Ponomareva, LV ;Horn, J ;Zhang, C ;Zhan, CG ;Voss, SR ;Leggas, M ;Thorson, JS "OleD Loki as a Catalyst for Hydroxamate Glycosylation." Chembiochem : a European journal of chemical biology 21, 7 (2020): 952-957.

Bubier, JA ;Philip, VM ;Quince, C ;Campbell, J ;Zhou, Y.;Vishnivetskaya, T ;Duvvuru, S ;Blair, RH ;Ndukum, J ;Donohue, KD ;Foster, CM ;Mellert, DJ ;... "A Microbe Associated with Sleep Revealed by a Novel Systems Genetic Analysis of the Microbiome in Collaborative Cross Mice." Genetics 214, 3 (2020): 719-733.

Mishra, I ;Pullum, KB ;Thayer, DC ;Plummer, ER ;Conkright, BW ;Morris, AJ ;O'Hara, BF ;Demas, GE ;Ashley, NT "Chemical sympathectomy reduces peripheral inflammatory responses to acute and chronic sleep fragmentation." American journal of physiology. Regulatory, integrative and comparative physiology 318, 4 (2020): R781-R789.

Dunoyer, LA ;Coomes, D ;Crowley, PH "Nonconsumptive predator effects modify crayfish-induced bioturbation as mediated by limb loss: Field and mesocosm experiments." Ecology and evolution 10, 6 (2020): 2739-2748.

Hunnicutt, KE ;Tiley, GP ;Williams, RC ;Larsen, PA ;Blanco, MB ;Rasoloarison, RM ;Campbell, CR ;Zhu, K ;Weisrock, DW ;Matsunami, H ;Yoder, AD "Comparative Genomic Analysis of the Pheromone Receptor Class 1 Family (V1R) Reveals Extreme Complexity in Mouse Lemurs (Genus, Microcebus) and a Chromosomal Hotspot across Mammals." Genome biology and evolution 12, 1 (2020): 3562-3579.

Maigret, TA ;Cox, JJ ;Weisrock, DW "A spatial genomic approach identifies time lags and historical barriers to gene flow in a rapidly fragmenting Appalachian landscape." Molecular ecology 29, 4 (2020): 673-685.

Shlensky, JA ;Thurber, KM ;O'Meara, JG ;Ou, NN ;Osborn, JL ;Dierkhising, RA ;Mara, KC ;Bierle, DM ;Daniels, PR "Unfractionated heparin infusion for treatment of venous thromboembolism based on actual body weight without dose capping." Vascular medicine (London, England) 25, 1 (2020): 47-54.

Dalmasso, C ;Osborn, JL ;Loria, AS "Sensory signals mediating high blood pressure via sympathetic activation: role of adipose afferent reflex." American journal of physiology. Regulatory, integrative and comparative physiology 318, 2 (2020): R379-R389.

Wang, Z.;Baskin, JM ;Baskin, CC ;Yang, X.;Liu, G.;Huang, Z. "Dynamics of the diaspore and germination stages of the life history of an annual diaspore-trimorphic species in a temperate salt desert." Planta 251, 4 (2020): 87.

Rosbakh, S ;Baskin, CC ;Baskin, JM "Nikolaeva et al.'s reference book on seed dormancy and germination." Ecology (2020):

Details

Liang, W ;Liu, Z.;Liu, M.;Qin, X ;Baskin, CC ;Baskin, JM ;Xin, Z ;Wang, Z.;Su, Z ;Zhou, Q "Wing loading, not terminal velocity, is the best parameter to predict capacity of diaspores for secondary wind dispersal." Journal of experimental botany (2020):

Harpole, CE ;Miles, MD ;Cassone, VM "Melatonin duration gates photoperiodic vocal state change in a songbird." Journal of pineal research 68, 2 (2020): e12625.

Thomas, JM ;Kern, PA ;Bush, HM ;McQuerry, KJ ;Black, WS ;Clasey, JL ;Pendergast, JS "Circadian rhythm phase shifts caused by timed exercise vary with chronotype." JCI insight 5, 3 (2020):

Meador, WD ;Sugerman, GP ;Story, HM ;Seifert, AW ;Bersi, MR ;Tepole, AB ;Rausch, MK "The regional-dependent biaxial behavior of young and aged mouse skin: A detailed histomechanical characterization, residual strain analysis, and constitutive model." Acta biomaterialia 101, (2020): 403-413.

Van Cleve, J "Building a synthetic basis for kin selection and evolutionary game theory using population genetics." Theoretical population biology (2020):

Harris, RB ;Irwin, K ;Jones, MR ;Laurent, S ;Barrett, RDH ;Nachman, MW ;Good, JM ;Linnen, CR ;Jensen, JD ;Pfeifer, SP "The population genetics of crypsis in vertebrates: recent insights from mice, hares, and lizards." Heredity 124, 1 (2020): 1-14.

Dwaraka, VB ;Smith, JJ ;Woodcock, MR ;Voss, SR "Comparative transcriptomics of limb regeneration: Identification of conserved expression changes among three species of Ambystoma." Genomics 111, 6 (2019): 1216-1225.

Smith, JJ ;Timoshevskaya, N ;Timoshevskiy, VA ;Keinath, MC ;Hardy, D ;Voss, SR "A chromosome-scale assembly of the axolotl genome." Genome research 29, 2 (2019): 317-324.

Marks, RA ;Smith, JJ ;Cronk, Q ;Grassa, CJ ;McLetchie, DN "Genome of the tropical plant Marchantia inflexa: implications for sex chromosome evolution and dehydration tolerance." Scientific reports 9, 1 (2019): 8722.

Hockman, D ;Chong-Morrison, V ;Green, SA ;Gavriouchkina, D ;Candido-Ferreira, I ;Ling, ITC ;Williams, RM ;Amemiya, CT ;Smith, JJ ;Bronner, ME ;Sauka-... "A genome-wide assessment of the ancestral neural crest gene regulatory network." Nature communications 10, 1 (2019): 4689.

Timoshevskiy, VA ;Timoshevskaya, NY ;Smith, JJ "Germline-Specific Repetitive Elements in Programmatically Eliminated Chromosomes of the Sea Lamprey (Petromyzon marinus)." Genes 10, 10 (2019):

Cyr, JL ;Gawriluk, TR ;Kimani, JM ;Rada, B ;Watford, WT ;Kiama, SG ;Seifert, AW ;Ezenwa, VO "Regeneration-Competent and -Incompetent Murids Differ in Neutrophil Quantity and Function." Integrative and comparative biology 59, 5 (2019): 1138-1149.

Baddar, NW Al Haj;Chithrala, A ;Voss, SR "Amputation-induced reactive oxygen species signaling is required for axolotl tail regeneration." Developmental dynamics : an official publication of the American Association of Anatomists 248, 2 (2019): 189-196.

Voss, SR ;Ponomareva, LV ;Dwaraka, VB ;Pardue, KE ;Baddar, NWAH ;Rodgers, AK ;Woodcock, MR ;Qiu, Q ;Crowner, A ;Blichmann, D ;Khatri, S ;Thorson, JS "HDAC Regulates Transcription at the Outset of Axolotl Tail Regeneration." Scientific reports 9, 1 (2019): 6751.

Wang, X.;Abbas, M ;Zhang, Y.;Elshahawi, SI ;Ponomareva, LV ;Cui, Z ;Van Lanen, SG ;Sajid, I ;Voss, SR ;Shaaban, KA ;Thorson, JS "Baraphenazines A-G, Divergent Fused Phenazine-Based Metabolites from a Himalayan Streptomyces." Journal of natural products 82, 6 (2019): 1686-1693.

Zhang, Y.;Ye, Q ;Ponomareva, LV ;Cao, Y ;Liu, Y.;Cui, Z ;Van Lanen, SG ;Voss, SR ;She, QB ;Thorson, JS "Total synthesis of griseusins and elucidation of the griseusin mechanism of action." Chemical science 10, 32 (2019): 7641-7648.

Dwaraka, VB ;Voss, SR "Towards comparative analyses of salamander limb regeneration." Journal of experimental zoology. Part B, Molecular and developmental evolution (2019):

Wang, X.;Elshahawi, SI ;Ponomareva, LV ;Ye, Q ;Liu, Y.;Copley, GC ;Hower, JC ;Hatcher, BE ;Kharel, MK ;Van Lanen, SG ;She, QB ;Voss, SR ;Thorson, JS... "Structure Determination, Functional Characterization, and Biosynthetic Implications of Nybomycin Metabolites from a Mining Reclamation Site-Associated Streptomyces." Journal of natural products 82, 12 (2019): 3469-3476.