Márquez-Zacarías, P., Pineau, R., Gómez, M., Veliz-Cuba, A., Murrugarra, D., Ratcliff, W., & Niklas, K. (2021). Evolution of Cellular Differentiation: From Hypotheses to Models. Trends in Ecology & Evolution, 36(1), 49-60. https://doi.org/10.1016/j.tree.2020.07.013

Wooten, D., Zañudo, J., Murrugarra, D., Perry, A., Dongari-Bagtzoglou, A., Laubenbacher, R., … Albert, R. (2021). Mathematical modeling of the Candida albicans yeast to hyphal transition reveals novel control strategies. PLoS Computational Biology, 17(3), e1008690. https://doi.org/10.1371/journal.pcbi.1008690

Aguilar, B., Fang, P., Laubenbacher, R., & Murrugarra, D. (2020). A Near-Optimal Control Method for Stochastic Boolean Networks. Letters in Biomathematics, 7(1), 67-80. (Original work published 2020)

Plaugher, D., & Murrugarra, D. (2021). Modeling the Pancreatic Cancer Microenvironment in Search of Control Targets. Bulletin of Mathematical Biology, 83(11), 115. https://doi.org/10.1007/s11538-021-00937-w (Original work published 2021)

, Smith, J., Cecil, R., Kabangu, M., Duerr, T., , … Murrugarra, D. HDAC Inhibitor Titration of Transcription and Axolotl Tail Regeneration. Frontiers in Cell and Developmental Biology, 9, 767377. https://doi.org/10.3389/fcell.2021.767377 (Original work published 2021)