Jeramiah Smith

  • Assistant Professor
  • Bioinformatics and Computational Biology
  • Biology
  • Cell and Developmental Biology
  • Ecology and Evolutionary Biology
  • Genetics and Genomics
311 Thomas Hunt Morgan
(859) 257-0124
Research Interests:
Education

Postdoctoral Fellow, U. Washington Dept. Genome Sciences & Benaroya Res. Inst. at Virginia Mason (2007 - 2011)
University of Kentucky, Ph.D. in Biology, 2007
Colorado State University, M.S. in Biology, 2002
Black Hills State University, B.S. in Biology, cum laude, 1998

Research

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CURRENTLY ACCEPTING GRADUATE STUDENTS - 2016 (FALL/SUMMER) NIH-FUNDED RESEARCH ASSISTANT TO STUDY PROGRAMMED GENOME REARRANGEMENT

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CLICK HERE FOR SMITH LAB WEBPAGE

 

 

PubMed Publications*: 
  • Dillard, DA ;Avey, JP ;Robinson, RF ;Smith, JJ ;Beals, J ;Manson, SM ;Comtois, KA "Demographic, Clinical, and Service Utilization Factors Associated with Suicide-Related Visits among Alaska Native and American Indian Adults." Suicide & life-threatening behavior (2016): Details. Full text
  • Braasch, I.;Gehrke, AR ;Smith, JJ ;Kawasaki, K ;Manousaki, T.;Pasquier, J ;Amores, A ;Desvignes, T ;Batzel, P ;Catchen, J ;Berlin, AM ;Campbell, MS ;Barrell, D ;Martin, KJ ;Mulley, JF ;Ravi, V.;Lee, AP ;Nakamura, T ;Chalopin, D.;Fan, S.;Wcisel, D ;Cañestro, C ;Sydes, J ;Beaudry, FE ;Sun, Y ;Hertel, J ;Beam, MJ ;Fasold, M ;Ishiyama, M ;Johnson, J.;Kehr, S ;Lara, M.;Letaw, JH ;Litman, GW ;Litman, RT ;Mikami, M ;Ota, T.;Saha, NR ;Williams, L.;Stadler, PF ;Wang, H.;Taylor, JS ;Fontenot, Q ;Ferrara, A ;Searle, SM ;Aken, B.;Yandell, M.;Schneider, I.;Yoder, JA ;Volff, JN ;Meyer, A.;Amemiya, CT ;Venkatesh, B.;Holland, PW ;Guiguen, Y ;Bobe, J ;Shubin, NH ;Di Palma, F.;Alföldi, J.;Lindblad-Toh, K.;Postlethwait, JH "The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons." Nature genetics 48, 4 (2016): 427-37. Details. Full text
  • Amemiya, CT ;Alföldi, J.;Lee, AP ;Fan, S.;Philippe, H.;Maccallum, I.;Braasch, I.;Manousaki, T.;Schneider, I.;Rohner, N.;Organ, C.;Chalopin, D.;Smith, JJ ;Robinson, M.;Dorrington, RA ;Gerdol, M.;Aken, B.;Biscotti, MA ;Barucca, M.;Baurain, D.;Berlin, AM ;Blatch, GL ;Buonocore, F.;Burmester, T.;Campbell, MS ;Canapa, A.;Cannon, JP ;Christoffels, A.;De Moro, G.;Edkins, AL ;Fan, L.;Fausto, AM ;Feiner, N.;Forconi, M.;Gamieldien, J.;Gnerre, S.;Gnirke, A.;Goldstone, JV ;Haerty, W.;Hahn, ME ;Hesse, U.;Hoffmann, S.;Johnson, J.;Karchner, SI ;Kuraku, S.;Lara, M.;Levin, JZ ;Litman, GW ;Mauceli, E.;Miyake, T.;Mueller, MG ;Nelson, DR ;Nitsche, A.;Olmo, E.;Ota, T.;Pallavicini, A.;Panji, S.;Picone, B.;Ponting, CP ;Prohaska, SJ ;Przybylski, D.;Saha, NR ;Ravi, V.;Ribeiro, FJ ;Sauka-Spengler, T.;Scapigliati, G.;Searle, SM ;Sharpe, T.;Simakov, O.;Stadler, PF ;Stegeman, JJ ;Sumiyama, K.;Tabbaa, D.;Tafer, H.;Turner-Maier, J.;Heusden, P.;White, S.;Williams, L.;Yandell, M.;Brinkmann, H.;Volff, JN ;Tabin, CJ ;Shubin, N.;Schartl, M.;Jaffe, DB ;Postlethwait, JH ;Venkatesh, B.;Di Palma, F.;Lander, ES ;Meyer, A.;Lindblad-Toh, K. "The African coelacanth genome provides insights into tetrapod evolution." Nature 496, 7445 (2013): 311-6. Details. Full text
  • Smith, JJ ;Kuraku, S.;Holt, C.;Sauka-Spengler, T.;Jiang, N.;Campbell, MS ;Yandell, MD ;Manousaki, T.;Meyer, A.;Bloom, OE ;Morgan, JR ;Buxbaum, JD ;Sachidanandam, R.;Sims, C.;Garruss, AS ;Cook, M.;Krumlauf, R.;Wiedemann, LM ;Sower, SA ;Decatur, WA ;Hall, JA ;Amemiya, CT ;Saha, NR ;Buckley, KM ;Rast, JP ;Das, S.;Hirano, M.;McCurley, N.;Guo, P.;Rohner, N.;Tabin, CJ ;Piccinelli, P.;Elgar, G.;Ruffier, M.;Aken, BL ;Searle, SM ;Muffato, M.;Pignatelli, M.;Herrero, J.;Jones, M.;Brown, CT ;Chung-Davidson, YW ;Nanlohy, KG ;Libants, SV ;Yeh, CY ;McCauley, DW ;Langeland, JA ;Pancer, Z.;Fritzsch, B.;Jong, PJ ;Zhu, B.;Fulton, LL ;Theising, B.;Flicek, P.;Bronner, ME ;Warren, WC ;Clifton, SW ;Wilson, RK ;Li, W. "Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution." Nature genetics 45, 4 (2013): 415-21, 421e1-2. Details. Full text
  • Smith, JJ ;Sumiyama, K.;Amemiya, CT "A living fossil in the genome of a living fossil: Harbinger transposons in the coelacanth genome." Molecular biology and evolution 29, 3 (2012): 985-93. Details. Full text
  • Smith, JJ ;Baker, C.;Eichler, EE ;Amemiya, CT "Genetic consequences of programmed genome rearrangement." Current biology : CB 22, 16 (2012): 1524-9. Details. Full text
  • Smith, JJ ;Saha, NR ;Amemiya, CT "Genome biology of the cyclostomes and insights into the evolutionary biology of vertebrate genomes." Integrative and comparative biology 50, 1 (2010): 130-7. Details. Full text
  • Smith, JJ ;Stuart, AB ;Sauka-Spengler, T.;Clifton, SW ;Amemiya, CT "Development and analysis of a germline BAC resource for the sea lamprey, a vertebrate that undergoes substantial chromatin diminution." Chromosoma 119, 4 (2010): 381-9. Details. Full text
  • Smith, JJ ;Antonacci, F.;Eichler, EE ;Amemiya, CT "Programmed loss of millions of base pairs from a vertebrate genome." Proceedings of the National Academy of Sciences of the United States of America 106, 27 (2009): 11212-7. Details. Full text
* Publications are automatically pulled from pubmed.gov based on a user-specific query. Results may include incorrect citations. See: Tutorial on improving PubMed results.
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